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I did in fact have to redo my standard errors using bootstrapping for one of the revisions
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I remember one of my grad school officemates getting super bogged down in different standard errors.
He was doing something that didn't neatly match any convention and there were about half a dozen plausibly correct methods to choose from, so he ended up spending weeks on making these big ugly tables comparing his results with each of the methods.
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Ahh, but were you using exactly the right kind of standard errors?